IL_8FLD_129
3D structure
- PDB id
- 8FLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State L1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- GGGGCUUCUGGCGCCAAG*CGAC
- Length
- 22 nucleotides
- Bulged bases
- 8FLD|1|L3|C|4116, 8FLD|1|L3|U|4117, 8FLD|1|L3|U|4118, 8FLD|1|L3|C|4119, 8FLD|1|L3|U|4120, 8FLD|1|L3|G|4121
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FLD|1|L3|G|4091
8FLD|1|L3|G|4092
8FLD|1|L3|G|4093
8FLD|1|L3|G|4094
8FLD|1|L3|C|4116
8FLD|1|L3|U|4117
8FLD|1|L3|U|4118
8FLD|1|L3|C|4119
8FLD|1|L3|U|4120
8FLD|1|L3|G|4121
8FLD|1|L3|G|4122
8FLD|1|L3|C|4123
8FLD|1|L3|G|4124
8FLD|1|L3|C|4125
8FLD|1|L3|C|4126
8FLD|1|L3|A|4127
8FLD|1|L3|A|4128
8FLD|1|L3|G|4129
*
8FLD|1|L3|C|4155
8FLD|1|L3|G|4156
8FLD|1|L3|A|4157
8FLD|1|L3|C|4158
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LJ
- 60S ribosomal protein L27
- Chain LO
- 60S ribosomal protein L30
- Chain LR
- 60S ribosomal protein L34
- Chain LX
- 60S ribosomal protein L37a
- Chain NL
- Ribosome biogenesis protein NOP53
- Chain SE
- 60S ribosomal protein L7a
- Chain SF
- 60S ribosomal protein L8
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