IL_8FLE_073

3D structure

PDB id

8FLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GACCCCAAAA*UGAAAAUGGAUGGCGC

Length

26 nucleotides

Bulged bases

8FLE|1|L3|C|1935, 8FLE|1|L3|A|2041, 8FLE|1|L3|U|2044

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLE|1|L3|G|1933
8FLE|1|L3|A|1934
8FLE|1|L3|C|1935
8FLE|1|L3|C|1936
8FLE|1|L3|C|1937
8FLE|1|L3|C|1938
8FLE|1|L3|A|1941
8FLE|1|L3|A|1942
8FLE|1|L3|A|1943
8FLE|1|L3|A|1944
*
8FLE|1|L3|U|2038
8FLE|1|L3|G|2039
8FLE|1|L3|A|2040
8FLE|1|L3|A|2041
8FLE|1|L3|A|2042
8FLE|1|L3|A|2043
8FLE|1|L3|U|2044
8FLE|1|L3|G|2045
8FLE|1|L3|G|2046
8FLE|1|L3|A|2047
8FLE|1|L3|U|2048
8FLE|1|L3|G|2049
8FLE|1|L3|G|2050
8FLE|1|L3|C|2051
8FLE|1|L3|G|2052
8FLE|1|L3|C|2053

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L10

Chain L4

5S ribosomal RNA; 5S rRNA

Chain L7

60S ribosomal protein L13a

Chain LN

60S ribosomal protein L3