IL_8FLF_063

3D structure

PDB id

8FLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GCGAA(PSU)G*CAAAC

Length

12 nucleotides

Bulged bases

8FLF|1|L3|G|1741, 8FLF|1|L3|A|1742

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLF|1|L3|G|1739
8FLF|1|L3|C|1740
8FLF|1|L3|G|1741
8FLF|1|L3|A|1742
8FLF|1|L3|A|1743
8FLF|1|L3|PSU|1744
8FLF|1|L3|G|1745
*
8FLF|1|L3|C|1785
8FLF|1|L3|A|1786
8FLF|1|L3|A|1787
8FLF|1|L3|A|1788
8FLF|1|L3|C|1789

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L10

Chain L4

5S ribosomal RNA; 5S rRNA

Chain LE

60S ribosomal protein L21

Chain SB

60S ribosomal protein L5