IL_8FLF_141

3D structure

PDB id

8FLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

A(OMG)ACAU(PSU)U*ACCA(PSU)CU

Length

15 nucleotides

Bulged bases

8FLF|1|L3|C|4670

QA status

Modified nucleotides: OMG, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLF|1|L3|A|4622
8FLF|1|L3|OMG|4623
8FLF|1|L3|A|4624
8FLF|1|L3|C|4625
8FLF|1|L3|A|4626
8FLF|1|L3|U|4627
8FLF|1|L3|PSU|4628
8FLF|1|L3|U|4629
*
8FLF|1|L3|A|4669
8FLF|1|L3|C|4670
8FLF|1|L3|C|4671
8FLF|1|L3|A|4672
8FLF|1|L3|PSU|4673
8FLF|1|L3|C|4674
8FLF|1|L3|U|4675

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L23

Chain LN

60S ribosomal protein L3

Chain SV

Probable ribosome biogenesis protein RLP24