IL_8FOM_168
3D structure
- PDB id
- 8FOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.58 Å
Loop
- Sequence
- GGAACC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FOM_168 not in the Motif Atlas
- Homologous match to IL_7RQB_112
- Geometric discrepancy: 0.2124
- The information below is about IL_7RQB_112
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FOM|1|RB|G|23
8FOM|1|RB|G|24
8FOM|1|RB|A|25
8FOM|1|RB|A|26
8FOM|1|RB|C|27
8FOM|1|RB|C|28
*
8FOM|1|RB|G|56
8FOM|1|RB|A|57
8FOM|1|RB|A|58
8FOM|1|RB|A|59
8FOM|1|RB|C|60
Current chains
- Chain RB
- 5S rRNA
Nearby chains
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
- Chain RG
- 50S ribosomal protein L5
- Chain RS
- 50S ribosomal protein L18
Coloring options: