IL_8FOM_350

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

AGUUGCCAGC*GGGCACUCU

Length

19 nucleotides

Bulged bases

8FOM|1|QA|U|1125, 8FOM|1|QA|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|QA|A|1123
8FOM|1|QA|G|1124
8FOM|1|QA|U|1125
8FOM|1|QA|U|1126
8FOM|1|QA|G|1127
8FOM|1|QA|C|1128
8FOM|1|QA|C|1129
8FOM|1|QA|A|1130
8FOM|1|QA|G|1131
8FOM|1|QA|C|1132
*
8FOM|1|QA|G|1142
8FOM|1|QA|G|1143
8FOM|1|QA|G|1144
8FOM|1|QA|C|1145
8FOM|1|QA|A|1146
8FOM|1|QA|C|1147
8FOM|1|QA|U|1148
8FOM|1|QA|C|1149
8FOM|1|QA|U|1150

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9

Chain QJ

30S ribosomal protein S10