IL_8FOM_351

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

CGAUG*CUAAUCG

Length

12 nucleotides

Bulged bases

8FOM|1|QA|U|1257, 8FOM|1|QA|A|1280, 8FOM|1|QA|U|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|QA|C|1254
8FOM|1|QA|G|1255
8FOM|1|QA|A|1256
8FOM|1|QA|U|1257
8FOM|1|QA|G|1258
*
8FOM|1|QA|C|1277
8FOM|1|QA|U|1278
8FOM|1|QA|A|1279
8FOM|1|QA|A|1280
8FOM|1|QA|U|1281
8FOM|1|QA|C|1282
8FOM|1|QA|G|1283

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QC

30S ribosomal protein S3

Chain QJ

30S ribosomal protein S10

Chain QN

30S ribosomal protein S14 type Z