IL_8FOM_361
3D structure
- PDB id
- 8FOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.58 Å
Loop
- Sequence
- GUUCCC*GAACAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FOM_361 not in the Motif Atlas
- Homologous match to IL_7A0S_105
- Geometric discrepancy: 0.3919
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
8FOM|1|RB|G|33
8FOM|1|RB|U|34
8FOM|1|RB|U|35
8FOM|1|RB|C|36
8FOM|1|RB|C|37
8FOM|1|RB|C|38
*
8FOM|1|RB|G|44
8FOM|1|RB|A|45
8FOM|1|RB|A|46
8FOM|1|RB|C|47
8FOM|1|RB|A|48
8FOM|1|RB|C|49
Current chains
- Chain RB
- 5S rRNA
Nearby chains
- Chain R4
- 50S ribosomal protein L31
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
- Chain RG
- 50S ribosomal protein L5
- Chain RS
- 50S ribosomal protein L18
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