IL_8FOM_373

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

8FOM|1|RA|C|2111, 8FOM|1|RA|G|2112, 8FOM|1|RA|U|2113, 8FOM|1|RA|G|2115, 8FOM|1|RA|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|RA|G|2110
8FOM|1|RA|C|2111
8FOM|1|RA|G|2112
8FOM|1|RA|U|2113
8FOM|1|RA|A|2114
8FOM|1|RA|G|2115
8FOM|1|RA|G|2116
8FOM|1|RA|A|2117
8FOM|1|RA|U|2118
8FOM|1|RA|A|2119
8FOM|1|RA|G|2120
*
8FOM|1|RA|C|2178
8FOM|1|RA|C|2179

Current chains

Chain RA

23S rRNA

Nearby chains