IL_8FON_017
3D structure
- PDB id
- 8FON (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- GGAAGAAGC*GUGUAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FON_017 not in the Motif Atlas
- Homologous match to IL_6CZR_129
- Geometric discrepancy: 0.1777
- The information below is about IL_6CZR_129
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58819.1
- Basepair signature
- cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8FON|1|QA|G|409
8FON|1|QA|G|410
8FON|1|QA|A|411
8FON|1|QA|A|412
8FON|1|QA|G|413
8FON|1|QA|A|414
8FON|1|QA|A|415
8FON|1|QA|G|416
8FON|1|QA|C|417
*
8FON|1|QA|G|426
8FON|1|QA|U|427
8FON|1|QA|G|428
8FON|1|QA|U|429
8FON|1|QA|A|430
8FON|1|QA|A|431
8FON|1|QA|A|432
8FON|1|QA|C|433
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QD
- 30S ribosomal protein S4
- Chain XK
- 30S ribosomal protein S11
Coloring options: