IL_8FON_087
3D structure
- PDB id
- 8FON (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FON_087 not in the Motif Atlas
- Homologous match to IL_7RQB_029
- Geometric discrepancy: 0.1111
- The information below is about IL_7RQB_029
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.1
- Basepair signature
- cWW-tSW-cWS-cSH-tWH-R-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
8FON|1|RA|G|864
8FON|1|RA|C|865
8FON|1|RA|A|866
8FON|1|RA|C|867
8FON|1|RA|U|868
*
8FON|1|RA|A|909
8FON|1|RA|A|910
8FON|1|RA|A|911
8FON|1|RA|C|912
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RB
- 5S ribosomal RNA; 5S rRNA
- Chain RQ
- 50S ribosomal protein L16
- Chain RZ
- 50S ribosomal protein L25
Coloring options: