IL_8FON_102

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGAUG*UAAG

Length

9 nucleotides

Bulged bases

8FON|1|RA|U|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_102 not in the Motif Atlas

Homologous match to IL_7RQB_046

Geometric discrepancy: 0.4159

The information below is about IL_7RQB_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.2

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

8FON|1|RA|C|1202
8FON|1|RA|G|1203
8FON|1|RA|A|1204
8FON|1|RA|U|1205
8FON|1|RA|G|1206
*
8FON|1|RA|U|1240
8FON|1|RA|A|1241
8FON|1|RA|A|1242
8FON|1|RA|G|1243

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RP

50S ribosomal protein L15