IL_8FON_221

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GUUGC*GGCACUC

Length

12 nucleotides

Bulged bases

8FON|1|XA|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_221 not in the Motif Atlas

Geometric match to IL_4LFB_048

Geometric discrepancy: 0.2969

The information below is about IL_4LFB_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89862.1

Basepair signature

cWW-L-tHS-L-R-L-cWW-L

Number of instances in this motif group

5

Unit IDs

8FON|1|XA|G|1124
8FON|1|XA|U|1125
8FON|1|XA|U|1126
8FON|1|XA|G|1127
8FON|1|XA|C|1128
*
8FON|1|XA|G|1143
8FON|1|XA|G|1144
8FON|1|XA|C|1145
8FON|1|XA|A|1146
8FON|1|XA|C|1147
8FON|1|XA|U|1148
8FON|1|XA|C|1149

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10