IL_8FR8_031
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GCUACU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 8FR8|1|A|U|981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FR8_031 not in the Motif Atlas
- Homologous match to IL_7RQB_029
- Geometric discrepancy: 0.1193
- The information below is about IL_7RQB_029
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.1
- Basepair signature
- cWW-tSW-cWS-cSH-tWH-R-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
8FR8|1|A|G|979
8FR8|1|A|C|980
8FR8|1|A|U|981
8FR8|1|A|A|982
8FR8|1|A|C|983
8FR8|1|A|U|984
*
8FR8|1|A|A|1024
8FR8|1|A|A|1025
8FR8|1|A|A|1026
8FR8|1|A|C|1027
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain N
- 50S ribosomal protein L16
Coloring options: