IL_8FR8_073

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

UAA*UCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FR8_073 not in the Motif Atlas

Homologous match to IL_4WF9_063

Geometric discrepancy: 0.0846

The information below is about IL_4WF9_063

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_10432.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

11

Unit IDs

8FR8|1|A|U|1881
8FR8|1|A|A|1882
8FR8|1|A|A|1883
*
8FR8|1|A|U|2219
8FR8|1|A|C|2220
8FR8|1|A|A|2221

Current chains

Chain A

23S rRNA (3119-MER)

Nearby chains

Chain C

50S ribosomal protein L19

Chain L

50S ribosomal protein L3

Chain U

50S ribosomal protein L14