IL_8FR8_112

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

8FR8|1|A|A|2796, 8FR8|1|A|C|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FR8_112 not in the Motif Atlas

Geometric match to IL_4WF9_096

Geometric discrepancy: 0.0986

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.3

Basepair signature

cWW-cWW

Number of instances in this motif group

26

Unit IDs

8FR8|1|A|C|2736
8FR8|1|A|G|2737
*
8FR8|1|A|C|2795
8FR8|1|A|A|2796
8FR8|1|A|C|2797
8FR8|1|A|G|2798

Current chains

Chain A

23S rRNA (3119-MER)

Nearby chains

Chain L

50S ribosomal protein L3

Chain T

50S ribosomal protein L13