IL_8FR8_168
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CGAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FR8_168 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.0794
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.2
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
8FR8|1|a|C|759
8FR8|1|a|G|760
8FR8|1|a|A|761
8FR8|1|a|A|762
8FR8|1|a|C|763
*
8FR8|1|a|G|779
8FR8|1|a|G|780
8FR8|1|a|U|781
8FR8|1|a|A|782
8FR8|1|a|G|783
Current chains
- Chain a
- 16S rRNA (1511-MER)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- 50S ribosomal protein L2
- Chain m
- 30S ribosomal protein S11
Coloring options: