IL_8FR8_204

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUGUAGGAUAGGUGGGAG*CGUUGUUGAAAUACCACUC

Length

37 nucleotides

Bulged bases

8FR8|1|A|U|2334, 8FR8|1|A|G|2338, 8FR8|1|A|U|2341, 8FR8|1|A|U|2395

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FR8|1|A|G|2333
8FR8|1|A|U|2334
8FR8|1|A|G|2335
8FR8|1|A|U|2336
8FR8|1|A|A|2337
8FR8|1|A|G|2338
8FR8|1|A|G|2339
8FR8|1|A|A|2340
8FR8|1|A|U|2341
8FR8|1|A|A|2342
8FR8|1|A|G|2343
8FR8|1|A|G|2344
8FR8|1|A|U|2345
8FR8|1|A|G|2346
8FR8|1|A|G|2347
8FR8|1|A|G|2348
8FR8|1|A|A|2349
8FR8|1|A|G|2350
*
8FR8|1|A|C|2384
8FR8|1|A|G|2385
8FR8|1|A|U|2386
8FR8|1|A|U|2387
8FR8|1|A|G|2388
8FR8|1|A|U|2389
8FR8|1|A|U|2390
8FR8|1|A|G|2391
8FR8|1|A|A|2392
8FR8|1|A|A|2393
8FR8|1|A|A|2394
8FR8|1|A|U|2395
8FR8|1|A|A|2396
8FR8|1|A|C|2397
8FR8|1|A|C|2398
8FR8|1|A|A|2399
8FR8|1|A|C|2400
8FR8|1|A|U|2401
8FR8|1|A|C|2402

Current chains

Chain A

23S rRNA (3119-MER)

Nearby chains