IL_8FTO_173
3D structure
- PDB id
- 8FTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with an improved MS2 tag inserted in H98
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.85 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FTO_173 not in the Motif Atlas
- Homologous match to IL_5J7L_354
- Geometric discrepancy: 0.0379
- The information below is about IL_5J7L_354
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_70411.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
8FTO|1|a|U|2880
8FTO|1|a|G|2881
8FTO|1|a|U|2882
8FTO|1|a|A|2883
8FTO|1|a|A|2884
8FTO|1|a|G|2885
*
8FTO|1|a|U|2898
8FTO|1|a|U|2899
8FTO|1|a|G|2900
8FTO|1|a|A|2901
8FTO|1|a|G|2902
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain m
- 50S ribosomal protein L17
- Chain o
- 50S ribosomal protein L19
Coloring options: