3D structure

PDB id
8FZD (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
AUGUGUAGGAUAG*CCUU
Length
17 nucleotides
Bulged bases
8FZD|1|A|G|2112
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FZD|1|A|A|2108
8FZD|1|A|U|2109
8FZD|1|A|G|2110
8FZD|1|A|U|2111
8FZD|1|A|G|2112
8FZD|1|A|U|2113
8FZD|1|A|A|2114
8FZD|1|A|G|2115
8FZD|1|A|G|2116
8FZD|1|A|A|2117
8FZD|1|A|U|2118
8FZD|1|A|A|2119
8FZD|1|A|G|2120
*
8FZD|1|A|C|2178
8FZD|1|A|C|2179
8FZD|1|A|U|2180
8FZD|1|A|U|2181

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain y
Transfer RNA; tRNA

Coloring options:

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