IL_8FZD_084

3D structure

PDB id

8FZD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUGG*CCACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GGUGG,CCACC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZD|1|A|G|2120
8FZD|1|A|G|2121
8FZD|1|A|U|2122
8FZD|1|A|G|2123
8FZD|1|A|G|2124
*
8FZD|1|A|C|2174
8FZD|1|A|C|2175
8FZD|1|A|A|2176
8FZD|1|A|C|2177
8FZD|1|A|C|2178

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain y

Transfer RNA; tRNA