IL_8FZD_172
3D structure
- PDB id
- 8FZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGACC*GCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZD_172 not in the Motif Atlas
- Homologous match to IL_5J7L_056
- Geometric discrepancy: 0.1422
- The information below is about IL_5J7L_056
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8FZD|1|a|C|1259
8FZD|1|a|G|1260
8FZD|1|a|A|1261
8FZD|1|a|C|1262
8FZD|1|a|C|1263
*
8FZD|1|a|G|1272
8FZD|1|a|C|1273
8FZD|1|a|A|1274
8FZD|1|a|A|1275
8FZD|1|a|G|1276
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
Coloring options: