IL_8FZE_185

3D structure

PDB id

8FZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

8FZE|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FZE_185 not in the Motif Atlas

Geometric match to IL_4V88_424

Geometric discrepancy: 0.2269

The information below is about IL_4V88_424

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

8FZE|1|A|G|880
8FZE|1|A|G|881
8FZE|1|A|G|882
*
8FZE|1|A|U|894
8FZE|1|A|U|895
8FZE|1|A|A|896
8FZE|1|A|C|897

Current chains

Chain A

23S Ribosomal RNA

Nearby chains