IL_8FZF_042

3D structure

PDB id

8FZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUGUUGGCU*GCCAUCAUU

Length

18 nucleotides

Bulged bases

8FZF|1|A|G|1059, 8FZF|1|A|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZF|1|A|A|1057
8FZF|1|A|U|1058
8FZF|1|A|G|1059
8FZF|1|A|U|1060
8FZF|1|A|U|1061
8FZF|1|A|G|1062
8FZF|1|A|G|1063
8FZF|1|A|C|1064
8FZF|1|A|U|1065
*
8FZF|1|A|G|1074
8FZF|1|A|C|1075
8FZF|1|A|C|1076
8FZF|1|A|A|1077
8FZF|1|A|U|1078
8FZF|1|A|C|1079
8FZF|1|A|A|1080
8FZF|1|A|U|1081
8FZF|1|A|U|1082

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L10

Chain J

50S ribosomal protein L11