IL_8FZF_091

3D structure

PDB id

8FZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

8FZF|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZF|1|A|G|2124
8FZF|1|A|G|2125
8FZF|1|A|A|2126
8FZF|1|A|G|2127
8FZF|1|A|G|2128
*
8FZF|1|A|C|2160
8FZF|1|A|C|2161
8FZF|1|A|G|2162
8FZF|1|A|A|2163
8FZF|1|A|C|2164
8FZF|1|A|C|2165
8FZF|1|A|U|2166
8FZF|1|A|U|2167
8FZF|1|A|G|2168
8FZF|1|A|A|2169
8FZF|1|A|A|2170
8FZF|1|A|A|2171
8FZF|1|A|U|2172
8FZF|1|A|A|2173
8FZF|1|A|C|2174

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain x

Transfer RNA; tRNA