IL_8FZF_092

3D structure

PDB id

8FZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCUUUGAAGU*AUGGAGC

Length

17 nucleotides

Bulged bases

8FZF|1|A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZF|1|A|G|2128
8FZF|1|A|C|2129
8FZF|1|A|U|2130
8FZF|1|A|U|2131
8FZF|1|A|U|2132
8FZF|1|A|G|2133
8FZF|1|A|A|2134
8FZF|1|A|A|2135
8FZF|1|A|G|2136
8FZF|1|A|U|2137
*
8FZF|1|A|A|2154
8FZF|1|A|U|2155
8FZF|1|A|G|2156
8FZF|1|A|G|2157
8FZF|1|A|A|2158
8FZF|1|A|G|2159
8FZF|1|A|C|2160

Current chains

Chain A

23S Ribosomal RNA

Nearby chains