IL_8FZF_093
3D structure
- PDB id
- 8FZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGG*CUGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZF_093 not in the Motif Atlas
- Geometric match to IL_5EW4_001
- Geometric discrepancy: 0.2929
- The information below is about IL_5EW4_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_43644.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FZF|1|A|G|2138
8FZF|1|A|U|2139
8FZF|1|A|G|2140
8FZF|1|A|G|2141
*
8FZF|1|A|C|2150
8FZF|1|A|U|2151
8FZF|1|A|G|2152
8FZF|1|A|C|2153
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain k
- 30S ribosomal protein S11
Coloring options: