IL_8FZF_207
3D structure
- PDB id
- 8FZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGCAUGG*UCAUCAUG
- Length
- 15 nucleotides
- Bulged bases
- 8FZF|1|a|C|1054, 8FZF|1|a|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZF_207 not in the Motif Atlas
- Geometric match to IL_4V88_510
- Geometric discrepancy: 0.2553
- The information below is about IL_4V88_510
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62984.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8FZF|1|a|U|1052
8FZF|1|a|G|1053
8FZF|1|a|C|1054
8FZF|1|a|A|1055
8FZF|1|a|U|1056
8FZF|1|a|G|1057
8FZF|1|a|G|1058
*
8FZF|1|a|U|1199
8FZF|1|a|C|1200
8FZF|1|a|A|1201
8FZF|1|a|U|1202
8FZF|1|a|C|1203
8FZF|1|a|A|1204
8FZF|1|a|U|1205
8FZF|1|a|G|1206
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- Small ribosomal subunit protein uS14
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