IL_8FZG_041
3D structure
- PDB id
- 8FZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 8FZG|1|A|A|1088
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZG_041 not in the Motif Atlas
- Geometric match to IL_3OXE_003
- Geometric discrepancy: 0.1481
- The information below is about IL_3OXE_003
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.6
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 41
Unit IDs
8FZG|1|A|G|1087
8FZG|1|A|A|1088
8FZG|1|A|A|1089
8FZG|1|A|A|1090
*
8FZG|1|A|U|1101
8FZG|1|A|C|1102
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain J
- 50S ribosomal protein L11
Coloring options: