IL_8FZG_199
3D structure
- PDB id
- 8FZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAGUU*AAUGUGCCUUCGGGAAC
- Length
- 23 nucleotides
- Bulged bases
- 8FZG|1|a|U|1025, 8FZG|1|a|U|1030, 8FZG|1|a|C|1031, 8FZG|1|a|G|1032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZG_199 not in the Motif Atlas
- Homologous match to IL_5J7L_045
- Geometric discrepancy: 0.5605
- The information below is about IL_5J7L_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_13394.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
- Number of instances in this motif group
- 1
Unit IDs
8FZG|1|a|G|1003
8FZG|1|a|A|1004
8FZG|1|a|A|1005
8FZG|1|a|G|1006
8FZG|1|a|U|1007
8FZG|1|a|U|1008
*
8FZG|1|a|A|1021
8FZG|1|a|A|1022
8FZG|1|a|U|1023
8FZG|1|a|G|1024
8FZG|1|a|U|1025
8FZG|1|a|G|1026
8FZG|1|a|C|1027
8FZG|1|a|C|1028
8FZG|1|a|U|1029
8FZG|1|a|U|1030
8FZG|1|a|C|1031
8FZG|1|a|G|1032
8FZG|1|a|G|1033
8FZG|1|a|G|1034
8FZG|1|a|A|1035
8FZG|1|a|A|1036
8FZG|1|a|C|1037
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
Coloring options: