IL_8FZH_004
3D structure
- PDB id
- 8FZH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 8FZH|1|A|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZH_004 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.0892
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
8FZH|1|A|G|81
8FZH|1|A|U|82
8FZH|1|A|A|83
8FZH|1|A|A|84
8FZH|1|A|G|85
*
8FZH|1|A|C|97
8FZH|1|A|G|98
8FZH|1|A|U|99
8FZH|1|A|U|100
8FZH|1|A|A|101
8FZH|1|A|U|102
8FZH|1|A|A|103
8FZH|1|A|A|104
8FZH|1|A|C|105
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain W
- 50S ribosomal protein L24
Coloring options: