IL_8FZH_051

3D structure

PDB id

8FZH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

8FZH|1|A|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FZH_051 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.0886

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8FZH|1|A|C|1417
8FZH|1|A|G|1418
8FZH|1|A|A|1419
8FZH|1|A|A|1420
8FZH|1|A|G|1421
*
8FZH|1|A|C|1577
8FZH|1|A|U|1578
8FZH|1|A|A|1579
8FZH|1|A|A|1580
8FZH|1|A|G|1581

Current chains

Chain A

23S Ribosomal RNA

Nearby chains