IL_8FZI_030

3D structure

PDB id

8FZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

8FZI|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FZI_030 not in the Motif Atlas

Geometric match to IL_2O3Y_001

Geometric discrepancy: 0.3028

The information below is about IL_2O3Y_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

8FZI|1|A|G|880
8FZI|1|A|G|881
8FZI|1|A|G|882
*
8FZI|1|A|U|894
8FZI|1|A|U|895
8FZI|1|A|A|896
8FZI|1|A|C|897

Current chains

Chain A

23S Ribosomal RNA

Nearby chains