IL_8FZI_186

3D structure

PDB id

8FZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGUUGC*GUGAUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZI|1|a|G|1421
8FZI|1|a|G|1422
8FZI|1|a|G|1423
8FZI|1|a|U|1424
8FZI|1|a|U|1425
8FZI|1|a|G|1426
8FZI|1|a|C|1427
*
8FZI|1|a|G|1473
8FZI|1|a|U|1474
8FZI|1|a|G|1475
8FZI|1|a|A|1476
8FZI|1|a|U|1477
8FZI|1|a|U|1478
8FZI|1|a|C|1479

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain M

50S ribosomal protein L14