IL_8FZI_209
3D structure
- PDB id
- 8FZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGCAUGG*UCAUCAUG
- Length
- 15 nucleotides
- Bulged bases
- 8FZI|1|a|C|1054, 8FZI|1|a|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZI_209 not in the Motif Atlas
- Geometric match to IL_4V88_510
- Geometric discrepancy: 0.1956
- The information below is about IL_4V88_510
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62984.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8FZI|1|a|U|1052
8FZI|1|a|G|1053
8FZI|1|a|C|1054
8FZI|1|a|A|1055
8FZI|1|a|U|1056
8FZI|1|a|G|1057
8FZI|1|a|G|1058
*
8FZI|1|a|U|1199
8FZI|1|a|C|1200
8FZI|1|a|A|1201
8FZI|1|a|U|1202
8FZI|1|a|C|1203
8FZI|1|a|A|1204
8FZI|1|a|U|1205
8FZI|1|a|G|1206
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain z
- F-UAA mRNA
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