IL_8FZI_211

3D structure

PDB id

8FZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZI|1|a|C|1303
8FZI|1|a|G|1304
8FZI|1|a|G|1305
8FZI|1|a|A|1306
8FZI|1|a|U|1307
8FZI|1|a|U|1308
8FZI|1|a|G|1309
*
8FZI|1|a|C|1328
8FZI|1|a|A|1329
8FZI|1|a|U|1330
8FZI|1|a|G|1331
8FZI|1|a|A|1332
8FZI|1|a|A|1333
8FZI|1|a|G|1334

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13