IL_8FZJ_085

3D structure

PDB id

8FZJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

8FZJ|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZJ|1|A|G|2110
8FZJ|1|A|U|2111
8FZJ|1|A|G|2112
8FZJ|1|A|U|2113
8FZJ|1|A|A|2114
8FZJ|1|A|G|2115
8FZJ|1|A|G|2116
8FZJ|1|A|A|2117
8FZJ|1|A|U|2118
8FZJ|1|A|A|2119
8FZJ|1|A|G|2120
*
8FZJ|1|A|C|2178
8FZJ|1|A|C|2179

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain x

Transfer RNA; tRNA