IL_8FZJ_194

3D structure

PDB id

8FZJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUU*AAUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FZJ_194 not in the Motif Atlas

Geometric match to IL_4V9F_053

Geometric discrepancy: 0.3791

The information below is about IL_4V9F_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49140.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

8FZJ|1|A|C|2104
8FZJ|1|A|U|2105
8FZJ|1|A|U|2106
*
8FZJ|1|A|A|2183
8FZJ|1|A|A|2184
8FZJ|1|A|U|2185
8FZJ|1|A|G|2186

Current chains

Chain A

23S Ribosomal RNA

Nearby chains