IL_8G2B_086

3D structure

PDB id

8G2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CUGUGAACC*GGGGAG

Length

15 nucleotides

Bulged bases

8G2B|1|1A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G2B|1|1A|C|2129
8G2B|1|1A|U|2130
8G2B|1|1A|G|2131
8G2B|1|1A|U|2132
8G2B|1|1A|G|2133
8G2B|1|1A|A|2134
8G2B|1|1A|A|2135
8G2B|1|1A|C|2136
8G2B|1|1A|C|2137
*
8G2B|1|1A|G|2154
8G2B|1|1A|G|2155
8G2B|1|1A|G|2156
8G2B|1|1A|G|2157
8G2B|1|1A|A|2158
8G2B|1|1A|G|2159

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains