IL_8G2C_260

3D structure

PDB id

8G2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CCUGUGAACC*GGGGAGG

Length

17 nucleotides

Bulged bases

8G2C|1|2A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G2C|1|2A|C|2128
8G2C|1|2A|C|2129
8G2C|1|2A|U|2130
8G2C|1|2A|G|2131
8G2C|1|2A|U|2132
8G2C|1|2A|G|2133
8G2C|1|2A|A|2134
8G2C|1|2A|A|2135
8G2C|1|2A|C|2136
8G2C|1|2A|C|2137
*
8G2C|1|2A|G|2154
8G2C|1|2A|G|2155
8G2C|1|2A|G|2156
8G2C|1|2A|G|2157
8G2C|1|2A|A|2158
8G2C|1|2A|G|2159
8G2C|1|2A|G|2160

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains