IL_8G2D_261

3D structure

PDB id

8G2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGAGCC*GGCGCCGGUGAAAUAC

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G2D|1|2A|G|2124
8G2D|1|2A|G|2125
8G2D|1|2A|A|2126
8G2D|1|2A|G|2127
8G2D|1|2A|C|2128
8G2D|1|2A|C|2129
*
8G2D|1|2A|G|2159
8G2D|1|2A|G|2160
8G2D|1|2A|C|2161
8G2D|1|2A|G|2162
8G2D|1|2A|C|2163
8G2D|1|2A|C|2164
8G2D|1|2A|G|2165
8G2D|1|2A|G|2166
8G2D|1|2A|U|2167
8G2D|1|2A|G|2168
8G2D|1|2A|A|2169
8G2D|1|2A|A|2170
8G2D|1|2A|A|2171
8G2D|1|2A|U|2172
8G2D|1|2A|A|2173
8G2D|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA