IL_8G34_092

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGAGGCUUUGAAGUGUGG*CUGCAUGGAGCCGACCUUGAAAUACC

Length

45 nucleotides

Bulged bases

8G34|1|B|U|2131, 8G34|1|B|U|2132, 8G34|1|B|G|2136, 8G34|1|B|U|2137, 8G34|1|B|G|2138, 8G34|1|B|U|2139, 8G34|1|B|G|2157, 8G34|1|B|U|2166, 8G34|1|B|U|2167, 8G34|1|B|A|2171

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G34|1|B|G|2123
8G34|1|B|G|2124
8G34|1|B|G|2125
8G34|1|B|A|2126
8G34|1|B|G|2127
8G34|1|B|G|2128
8G34|1|B|C|2129
8G34|1|B|U|2130
8G34|1|B|U|2131
8G34|1|B|U|2132
8G34|1|B|G|2133
8G34|1|B|A|2134
8G34|1|B|A|2135
8G34|1|B|G|2136
8G34|1|B|U|2137
8G34|1|B|G|2138
8G34|1|B|U|2139
8G34|1|B|G|2140
8G34|1|B|G|2141
*
8G34|1|B|C|2150
8G34|1|B|U|2151
8G34|1|B|G|2152
8G34|1|B|C|2153
8G34|1|B|A|2154
8G34|1|B|U|2155
8G34|1|B|G|2156
8G34|1|B|G|2157
8G34|1|B|A|2158
8G34|1|B|G|2159
8G34|1|B|C|2160
8G34|1|B|C|2161
8G34|1|B|G|2162
8G34|1|B|A|2163
8G34|1|B|C|2164
8G34|1|B|C|2165
8G34|1|B|U|2166
8G34|1|B|U|2167
8G34|1|B|G|2168
8G34|1|B|A|2169
8G34|1|B|A|2170
8G34|1|B|A|2171
8G34|1|B|U|2172
8G34|1|B|A|2173
8G34|1|B|C|2174
8G34|1|B|C|2175

Current chains

Chain B

23S

Nearby chains