IL_8G34_187

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAGCCUUGAUG*CUUUAAUGUUUG

Length

24 nucleotides

Bulged bases

8G34|1|B|A|2101, 8G34|1|B|G|2107, 8G34|1|B|A|2183, 8G34|1|B|G|2186

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G34|1|B|U|2099
8G34|1|B|G|2100
8G34|1|B|A|2101
8G34|1|B|G|2102
8G34|1|B|C|2103
8G34|1|B|C|2104
8G34|1|B|U|2105
8G34|1|B|U|2106
8G34|1|B|G|2107
8G34|1|B|A|2108
8G34|1|B|U|2109
8G34|1|B|G|2110
*
8G34|1|B|C|2179
8G34|1|B|U|2180
8G34|1|B|U|2181
8G34|1|B|U|2182
8G34|1|B|A|2183
8G34|1|B|A|2184
8G34|1|B|U|2185
8G34|1|B|G|2186
8G34|1|B|U|2187
8G34|1|B|U|2188
8G34|1|B|U|2189
8G34|1|B|G|2190

Current chains

Chain B

23S

Nearby chains

Chain v

Small subunit ribosomal RNA; SSU rRNA