IL_8G38_090

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGAGGCUUUGAAGUGUGG*CUGCAUGGAGCCGACCUUGAAAUACC

Length

45 nucleotides

Bulged bases

8G38|1|B|U|2131, 8G38|1|B|U|2132, 8G38|1|B|G|2136, 8G38|1|B|U|2139, 8G38|1|B|U|2155, 8G38|1|B|U|2167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G38|1|B|G|2123
8G38|1|B|G|2124
8G38|1|B|G|2125
8G38|1|B|A|2126
8G38|1|B|G|2127
8G38|1|B|G|2128
8G38|1|B|C|2129
8G38|1|B|U|2130
8G38|1|B|U|2131
8G38|1|B|U|2132
8G38|1|B|G|2133
8G38|1|B|A|2134
8G38|1|B|A|2135
8G38|1|B|G|2136
8G38|1|B|U|2137
8G38|1|B|G|2138
8G38|1|B|U|2139
8G38|1|B|G|2140
8G38|1|B|G|2141
*
8G38|1|B|C|2150
8G38|1|B|U|2151
8G38|1|B|G|2152
8G38|1|B|C|2153
8G38|1|B|A|2154
8G38|1|B|U|2155
8G38|1|B|G|2156
8G38|1|B|G|2157
8G38|1|B|A|2158
8G38|1|B|G|2159
8G38|1|B|C|2160
8G38|1|B|C|2161
8G38|1|B|G|2162
8G38|1|B|A|2163
8G38|1|B|C|2164
8G38|1|B|C|2165
8G38|1|B|U|2166
8G38|1|B|U|2167
8G38|1|B|G|2168
8G38|1|B|A|2169
8G38|1|B|A|2170
8G38|1|B|A|2171
8G38|1|B|U|2172
8G38|1|B|A|2173
8G38|1|B|C|2174
8G38|1|B|C|2175

Current chains

Chain B

23S

Nearby chains