IL_8G38_114
3D structure
- PDB id
- 8G38 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGA*UA
- Length
- 5 nucleotides
- Bulged bases
- 8G38|1|v|G|31
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G38_114 not in the Motif Atlas
- Homologous match to IL_5J7L_001
- Geometric discrepancy: 0.1456
- The information below is about IL_5J7L_001
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
8G38|1|v|U|30
8G38|1|v|G|31
8G38|1|v|A|32
*
8G38|1|v|U|552
8G38|1|v|A|553
Current chains
- Chain v
- 16S
Nearby chains
- Chain c
- 30S ribosomal protein S4
- Chain k
- 30S ribosomal protein S12
Coloring options: