IL_8G38_185
3D structure
- PDB id
- 8G38 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAUG*CGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCG
- Length
- 47 nucleotides
- Bulged bases
- 8G38|1|v|A|1238, 8G38|1|v|U|1240, 8G38|1|v|C|1302, 8G38|1|v|U|1308, 8G38|1|v|C|1317, 8G38|1|v|A|1318, 8G38|1|v|U|1326, 8G38|1|v|C|1327
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8G38|1|v|C|1237
8G38|1|v|A|1238
8G38|1|v|A|1239
8G38|1|v|U|1240
8G38|1|v|G|1241
*
8G38|1|v|C|1296
8G38|1|v|G|1297
8G38|1|v|U|1298
8G38|1|v|A|1299
8G38|1|v|G|1300
8G38|1|v|U|1301
8G38|1|v|C|1302
8G38|1|v|C|1303
8G38|1|v|G|1304
8G38|1|v|G|1305
8G38|1|v|A|1306
8G38|1|v|U|1307
8G38|1|v|U|1308
8G38|1|v|G|1309
8G38|1|v|G|1310
8G38|1|v|A|1311
8G38|1|v|G|1312
8G38|1|v|U|1313
8G38|1|v|C|1314
8G38|1|v|U|1315
8G38|1|v|G|1316
8G38|1|v|C|1317
8G38|1|v|A|1318
8G38|1|v|A|1319
8G38|1|v|C|1320
8G38|1|v|U|1321
8G38|1|v|C|1322
8G38|1|v|G|1323
8G38|1|v|A|1324
8G38|1|v|C|1325
8G38|1|v|U|1326
8G38|1|v|C|1327
8G38|1|v|C|1328
8G38|1|v|A|1329
8G38|1|v|U|1330
8G38|1|v|G|1331
8G38|1|v|A|1332
8G38|1|v|A|1333
8G38|1|v|G|1334
8G38|1|v|U|1335
8G38|1|v|C|1336
8G38|1|v|G|1337
Current chains
- Chain v
- 16S
Nearby chains
- Chain f
- 30S ribosomal protein S7
- Chain l
- 30S ribosomal protein S13
- Chain m
- 30S ribosomal protein S14
- Chain r
- 30S ribosomal protein S19
Coloring options: