IL_8G4S_077
3D structure
- PDB id
- 8G4S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.14 Å
Loop
- Sequence
- GCCAGCCGG*CGCGGAGCC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8G4S|1|2|G|1183
8G4S|1|2|C|1184
8G4S|1|2|C|1185
8G4S|1|2|A|1186
8G4S|1|2|G|1187
8G4S|1|2|C|1188
8G4S|1|2|C|1189
8G4S|1|2|G|1190
8G4S|1|2|G|1191
*
8G4S|1|2|C|1206
8G4S|1|2|G|1207
8G4S|1|2|C|1208
8G4S|1|2|G|1209
8G4S|1|2|G|1210
8G4S|1|2|A|1211
8G4S|1|2|G|1212
8G4S|1|2|C|1213
8G4S|1|2|C|1214
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain D
- Ribosomal protein S3
- Chain F
- SSU ribosomal protein S7P (Fragment)
- Chain Q
- Ribosomal protein S16
- Chain T
- SSU ribosomal protein S19E (Fragment)
- Chain U
- Ribosomal protein S20
- Chain d
- Ribosomal protein S29A
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