IL_8G5Y_176
3D structure
- PDB id
- 8G5Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- GUCCUG*CGUCAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G5Y_176 not in the Motif Atlas
- Geometric match to IL_6O5F_001
- Geometric discrepancy: 0.3919
- The information below is about IL_6O5F_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
8G5Y|1|L5|G|4884
8G5Y|1|L5|U|4885
8G5Y|1|L5|C|4886
8G5Y|1|L5|C|4887
8G5Y|1|L5|U|4888
8G5Y|1|L5|G|4889
*
8G5Y|1|L5|C|4930
8G5Y|1|L5|G|4931
8G5Y|1|L5|U|4932
8G5Y|1|L5|C|4933
8G5Y|1|L5|A|4934
8G5Y|1|L5|C|4935
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L6
- Chain LM
- 60S ribosomal protein L14
- Chain LO
- 60S ribosomal protein L13a
- Chain Lf
- 60S ribosomal protein L35a
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