IL_8G5Z_026

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

GAG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G5Z_026 not in the Motif Atlas

Geometric match to IL_4J50_002

Geometric discrepancy: 0.1256

The information below is about IL_4J50_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

8G5Z|1|L5|G|462
8G5Z|1|L5|A|463
8G5Z|1|L5|G|464
*
8G5Z|1|L5|C|691
8G5Z|1|L5|A|692
8G5Z|1|L5|C|693

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

eL6

Chain Lr

60S ribosomal protein L28