IL_8G5Z_123

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AA(PSU)GAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|L5|G|3714
8G5Z|1|L5|PSU|3715
8G5Z|1|L5|C|3716
8G5Z|1|L5|A|3717
8G5Z|1|L5|A2M|3718
8G5Z|1|L5|A|3719
8G5Z|1|L5|G|3720
8G5Z|1|L5|U|3721
*
8G5Z|1|L5|A|3732
8G5Z|1|L5|A|3733
8G5Z|1|L5|PSU|3734
8G5Z|1|L5|G|3735
8G5Z|1|L5|A|3736
8G5Z|1|L5|A|3737
8G5Z|1|L5|G|3738
8G5Z|1|L5|C|3739

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

uL2

Chain Li

60S ribosomal protein L36

Chain Lo

Ribosomal protein L36a

Chain Lz

uL1